Sökning: "cultivation-independent methods"

Hittade 3 avhandlingar innehållade orden cultivation-independent methods.

  1. 1. Exploration of microbial diversity and evolution through cultivation independent phylogenomics

    Författare :Joran Martijn; Thijs J.G. Ettema; Andrew Roger; Uppsala universitet; []
    Nyckelord :NATURVETENSKAP; NATURAL SCIENCES; cultivation independent genomics; metagenomics; single-cell genomics; metagenomic binning; phylogenetics; phylogenomics; phylogenetic artefacts; comparative genomics; gene tree-species tree reconciliation; rRNA amplicon sequencing; Tara Oceans; origin of mitochondria; Alphaproteobacteria; Rickettsiales; Haloarchaea; endosymbiosis; Biologi med inriktning mot molekylär evolution; Biology with specialization in Molecular Evolution;

    Sammanfattning : Our understanding of microbial evolution is largely dependent on available genomic data of diverse organisms. Yet, genome-sequencing efforts have mostly ignored the diverse uncultivable majority in favor of cultivable and sociologically relevant organisms. LÄS MER

  3. 2. Novel insights into protist diversity and niche adaptation using single cell transcriptomics

    Författare :Henning Onsbring; Thijs J. G. Ettema; Alastair Simpson; Uppsala universitet; []
    Nyckelord :NATURVETENSKAP; NATURAL SCIENCES; Protists; microbial eukaryotes; cultivation-independent methods; single-cell RNA sequencing; phylogenomics; Biologi med inriktning mot molekylär evolution; Biology with specialization in Molecular Evolution;

    Sammanfattning : Protists are a polyphyletic group of microbes that represents the vast majority of eukaryotic diversity. Despite this, most sequencing efforts targeting eukaryotes have been focused on animals, fungi and plants. LÄS MER

  4. 3. Expanding the Chlamydiae tree : Insights into genome diversity and evolution

    Författare :Jennah E. Dharamshi; Thijs J. G. Ettema; Alexander Probst; Uppsala universitet; []
    Nyckelord :NATURVETENSKAP; NATURAL SCIENCES; NATURVETENSKAP; NATURAL SCIENCES; PVC superphylum; Chlamydiae; chlamydia; intracellular; symbiosis; endosymbiont; pathogen; marine sediment; sponge microbiome; metagenomics; uncultured microbial diversity; phylogenomics; microbial evolution; eukaryote evolution; Biologi med inriktning mot molekylär evolution; Biology with specialization in Molecular Evolution;

    Sammanfattning : Chlamydiae is a phylum of obligate intracellular bacteria. They have a conserved lifecycle and infect eukaryotic hosts, ranging from animals to amoeba. Chlamydiae includes pathogens, and is well-studied from a medical perspective. LÄS MER