Sökning: "Pacbio"

Visar resultat 1 - 5 av 10 avhandlingar innehållade ordet Pacbio.

1. 1. Environmental sequencing to infer patterns of eukaryotic evolution : Combining long-read and short-read metabarcoding

   Författare :Mahwash Jamy; Fabien Burki; Micah Dunthorn; Uppsala universitet; []
   Nyckelord :NATURVETENSKAP; NATURAL SCIENCES; Protists; eukaryotes; environmental sequencing; ribosomal DNA; PacBio; long-read metabarcoding; phylogenetics; salt barrier; habitat evolution; eukaryotes evolution; evolutionary rate; Apicomplexa; pathogen; Biology with specialization in Systematics; Biologi med inriktning mot systematik;

   Sammanfattning : Our view of eukaryotes is biased towards plants, animals, and fungi. But the vast majority of eukaryotic diversity is microbial in nature. These microbial eukaryotes are key players in all ecosystems on earth and are collectively known as protists. LÄS MER

3. 2. Genomic adaptation and gene-dosage regulation of Drosophila melanogaster cells, and long-read software developments

   Författare :Jacob Lewerentz; Per Stenberg; Jan Larsson; Bergman Casey; Umeå universitet; []
   Nyckelord :NATURVETENSKAP; NATURAL SCIENCES; NATURVETENSKAP; NATURAL SCIENCES; Drosophila; cell line; long read; Nanopore; Pacbio; Illumina; cancer; genome evolution; dosage compensation; structural variant; software; bioinformatics;

   Sammanfattning : Cells are the vehicles that allows genetic code to proliferate in the world, taking on various forms – as illustrated by the tree of life. The cell features are determined by the manufacturing of proteins, a process that has its blueprints encoded as genes in the genome. LÄS MER

4. 3. Fungal communities of West African ectomycorrhizal woodlands

   Författare :Brendan R. Furneaux; Martin Ryberg; Matthew Smith; Uppsala universitet; []
   Nyckelord :NATURVETENSKAP; NATURAL SCIENCES; ectomycorrhizal fungi; West Africa; metabarcoding; Sudanian woodlands; community ecology; ethnomycology; edible mushrooms; fungi; Biology with specialization in Systematics; Biologi med inriktning mot systematik;

   Sammanfattning : Ectomycorrhizal symbiosis is a widespread mutualist relationship between fungi and plants, often trees. It is most well-known in temperate and boreal forests, but also occurs in a variety of tropical ecosystems, including Sudanian savanna woodlands and gallery forests in West Africa. LÄS MER

5. 4. Exploring human variations by droplet barcoding

   Författare :Pontus Höjer; Afshin Ahmadian; Pelin Sahlén; Lars Feuk; KTH; []
   Nyckelord :NATURVETENSKAP; NATURAL SCIENCES; NATURVETENSKAP; NATURAL SCIENCES; NATURVETENSKAP; NATURAL SCIENCES; droplets; linked-read sequencing; DNA barcoding; proteomics; genomics; single cell; single extracellular vesicle; single exosome; pipelines; Biotechnology; Bioteknologi;

   Sammanfattning : Biological variations are being explored at ever-increasing rates through the rapid advancement of analytical techniques. Techniques like massively parallel sequencing empower scientists to accurately differentiate individuals’ genetic compositions, cellular functionalities, and healthy tissue from diseased. LÄS MER

7. 5. Counting molecules in cell-free DNA and single cells RNA

   Författare :Kasper Karlsson; Karolinska Institutet; Karolinska Institutet; []
   Nyckelord :UMI;

   Sammanfattning : The field of Molecular Biology got started in earnest with the discovery of the molecular structure of DNA. This lead to a surge of interest into the relationships between DNA, RNA and proteins, and to the development of fundamental tools for manipulating those substances, such as cutting, ligating, amplifying, visualizing and size-selecting DNA. LÄS MER