Sökning: "PacBio"

Visar resultat 1 - 5 av 7 avhandlingar innehållade ordet PacBio.

  1. 1. Environmental sequencing to infer patterns of eukaryotic evolution : Combining long-read and short-read metabarcoding

    Författare :Mahwash Jamy; Fabien Burki; Micah Dunthorn; Uppsala universitet; []
    Nyckelord :NATURAL SCIENCES; NATURVETENSKAP; Protists; eukaryotes; environmental sequencing; ribosomal DNA; PacBio; long-read metabarcoding; phylogenetics; salt barrier; habitat evolution; eukaryotes evolution; evolutionary rate; Apicomplexa; pathogen; Biology with specialization in Systematics; Biologi med inriktning mot systematik;

    Sammanfattning : Our view of eukaryotes is biased towards plants, animals, and fungi. But the vast majority of eukaryotic diversity is microbial in nature. These microbial eukaryotes are key players in all ecosystems on earth and are collectively known as protists. LÄS MER

  2. 2. Fungal communities of West African ectomycorrhizal woodlands

    Författare :Brendan R. Furneaux; Martin Ryberg; Matthew Smith; Uppsala universitet; []
    Nyckelord :NATURAL SCIENCES; NATURVETENSKAP; NATURVETENSKAP; NATURAL SCIENCES; ectomycorrhizal fungi; West Africa; metabarcoding; Sudanian woodlands; community ecology; ethnomycology; edible mushrooms; fungi; Biology with specialization in Systematics; Biologi med inriktning mot systematik;

    Sammanfattning : Ectomycorrhizal symbiosis is a widespread mutualist relationship between fungi and plants, often trees. It is most well-known in temperate and boreal forests, but also occurs in a variety of tropical ecosystems, including Sudanian savanna woodlands and gallery forests in West Africa. LÄS MER

  3. 3. Counting molecules in cell-free DNA and single cells RNA

    Författare :Kasper Karlsson; Karolinska Institutet; Karolinska Institutet; []
    Nyckelord :MEDICAL AND HEALTH SCIENCES; MEDICIN OCH HÄLSOVETENSKAP; UMI;

    Sammanfattning : The field of Molecular Biology got started in earnest with the discovery of the molecular structure of DNA. This lead to a surge of interest into the relationships between DNA, RNA and proteins, and to the development of fundamental tools for manipulating those substances, such as cutting, ligating, amplifying, visualizing and size-selecting DNA. LÄS MER

  4. 4. Applying massive parallel sequencing technologies to unravel the genomic complexity in domestic species

    Författare :Agnese Viluma; Sveriges lantbruksuniversitet; Sveriges lantbruksuniversitet; []
    Nyckelord :NATURVETENSKAP; LANTBRUKSVETENSKAPER; LANTBRUKSVETENSKAPER; NATURAL SCIENCES; AGRICULTURAL SCIENCES; AGRICULTURAL SCIENCES;

    Sammanfattning : Massive parallel sequencing technologies have made a remarkable contribution in understanding the genomic complexity in human and other mammalian species. This thesis includes four studies illustrating the technology change from short-read to long-read massive parallel sequencing and the corresponding layers of genomic complexity resolved in dog and horse. LÄS MER

  5. 5. Culture-independent methods and high-throughput sequencing applied to evolutionary microbial genomics

    Författare :Anders E. Lind; Thijs JG Ettema; Purificación López-García; Uppsala universitet; []
    Nyckelord :NATURAL SCIENCES; NATURVETENSKAP; NATURVETENSKAP; NATURAL SCIENCES; Single cell genomics; metagenomics; amplicon; archaea; haloarchaea; endosymbiosis; ciliate; hydrogenosome; tree reconciliation;

    Sammanfattning : Culture-independent methods allow us to better understand the diversity of microorganisms on earth. By omitting the culturing step, we can gain access to species previously out of our reach.To better capture and understand the diversity of microorganisms, we have developed an alternative to 16S amplicon sequencing. LÄS MER